BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028H05SP1|AL428977
(829 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig163 1409 0.0
3x_Contig1499 170 3e-42
>3x_Contig163
Length = 1048
Score = 1409 bits (711), Expect = 0.0
Identities = 713/714 (99%)
Strand = Plus / Minus
Query: 1 atacatttacaatcgaaatggcaaaattaatgatgattgcagtatcagggaatgccttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 atacatttacaatcgaaatggcaaaattaatgatgattgcagtatcagggaatgccttct 655
Query: 61 ttatcactttgacaccataaaatacaattgaatttataccacaaaattgttgagccatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ttatcactttgacaccataaaatacaattgaatttataccacaaaattgttgagccatta 595
Query: 121 atatagttgtgatgactcttcttgggtacttgtacttcggatccttccagtattcaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 atatagttgtgatgactcttcttgggtacttgtacttcggatccttccagtattcaacaa 535
Query: 181 cggttatcgattccgaatctctcaacgaagatctcgtagatgacggtctctccaagttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cggttatcgattccgaatctctcaacgaagatctcgtagatgacggtctctccaagttca 475
Query: 241 aattggaccccagattcatctgagagttcgtatgagcttctaaatcactaaacgtcctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aattggaccccagattcatctgagagttcgtatgagcttctaaatcactaaacgtcctca 415
Query: 301 ccggttgcgacccttgcaaccaaccatcaatctcctgtctagactcctgccgagagttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ccggttgcgacccttgcaaccaaccatcaatctcctgtctagactcctgccgagagttgc 355
Query: 361 cacgtaattgtgataaaacatcctctgcgtctgtcatgttccctttagaaacgagccatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cacgtaattgtgataaaacatcctctgcgtctgtcatgttccctttagaaacgagccatc 295
Query: 421 ttggtgactcgtttattctgaacaagagaccaaaatttagtaaagagattaacccaccga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttggtgactcgtttattctgaacaagagaccaaaatttagtaaagagattaacccaccga 235
Query: 481 acagaagaatccatctccattgcaacatgttagcccataacatagctaaagactgtgtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 acagaagaatccatctccattgcaacatgttagcccataacatagctaaagactgtgtca 175
Query: 541 ctagaatcccacagtttatacttacttgattcatagatcctaaagaccctttcaaatgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ctagaatcccacagtttatacttacttgattcatagatcctaaagaccctttcaaatgta 115
Query: 601 ccggtgacatctcattgataaacaatggagtgacaacgntcaaactcccgcatgaaatac 660
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 114 ccggtgacatctcattgataaacaatggagtgacaacgatcaaactcccgcatgaaatac 55
Query: 661 cagccagtaatcttccgaacagcatcccaagatagttgttgctggaaaatagac 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 cagccagtaatcttccgaacagcatcccaagatagttgttgctggaaaatagac 1
>3x_Contig1499
Length = 7822
Score = 170 bits (86), Expect = 3e-42
Identities = 89/90 (98%)
Strand = Plus / Minus
Query: 740 acagttccaataactgatcggtttcctaccataagaatccgctaatggtccagccactag 799
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7821 acagttccaataactgatcggtttcctaccataagaatccgcttatggtccagccactag 7762
Query: 800 agacccaatcaatcctccaacactgaaaac 829
||||||||||||||||||||||||||||||
Sbjct: 7761 agacccaatcaatcctccaacactgaaaac 7732
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5284
Number of Sequences: 1807
Number of extensions: 5284
Number of successful extensions: 19
Number of sequences better than 1.0e-20: 2
length of query: 829
length of database: 10,358,551
effective HSP length: 16
effective length of query: 813
effective length of database: 10,329,639
effective search space: 8397996507
effective search space used: 8397996507
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)